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Getting started
Schema
Clear Filters
Annotation type
2636
pQTL
1621
candidate regulatory elements
1279
target gene predictions
952
histone modifications
895
chromatin state
824
accessible chromatin
786
binding sites
636
gene expression
421
differential activity
159
eQTL
125
variant allelic effects
68
Fine-mapped variants
22
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
2
other
1
representative DNase hypersensitivity sites
Annotation Category
5079
cis-regulatory elements
3028
Genetic variant effects
1279
Target gene links
1057
Gene expression levels
1
Others
Annotation type Category
5023
ChIP-seq
2899
DNase-seq
2636
quantitative proteomics
495
RNA-seq
450
ATAC-seq
399
snATAC-seq
290
single cell RNA-seq
188
HiC
134
scRNA-seq
126
H3K27ac ChIP-Seq
76
snDropSeq
44
pCHi-C
23
snRNA-seq
14
Expression arrays
3
Capture-C
3
DNA methylation profiling by array assay
3
RNA microarray
1
SNP-SELEX
Available data
5724
bed bed3+
3487
tsv
827
bed bed9
479
bigWig
105
txt
37
bigBed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
11
bed bed3
11
bed narrowPeak
4
bam
3
bed gappedPeak
3
xls
File set status
10443
released
1
revoked
Genome assembly (visualization)
6593
hg19
1777
GRCh38
2
hg18
Organism
10396
Homo sapiens
Biosample type
5184
tissue
2518
primary cell
2320
cell line
418
in vitro differentiated cells
3
stem cell
Biosample term
2636
whole blood
131
monocyte
91
heart
86
stomach
81
kidney
72
brain
68
lung
67
endothelial cell
67
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
62
adrenal gland
60
B cell
60
placenta
58
muscle of leg
56
large intestine
54
H1-hESC
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
51
CD8-positive, alpha-beta T cell
51
neural progenitor cell
50
macrophage
48
thymus
47
liver
45
right lung
44
islet of Langerhans
43
hematopoietic multipotent progenitor cell
43
smooth muscle cell
42
hepatocyte
42
natural killer cell
42
right kidney
41
K562
40
T cell
40
renal cortex interstitium
40
renal pelvis
40
retina
36
left kidney
35
cardiac muscle cell
35
spinal cord
34
heart left ventricle
32
CD4-positive, alpha-beta memory T cell
32
spleen
31
CD14-positive monocyte
31
pancreatic ductal cell
28
regulatory T cell
26
MCF-7
25
epithelial cell of proximal tubule
24
body of pancreas
24
tibial nerve
23
T-helper 1 cell
23
neuron
23
sigmoid colon
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
caudate nucleus
22
foreskin keratinocyte
22
pancreas
21
EndoC_BH1
21
T-helper 17 cell
21
glomerular endothelial cell
21
keratinocyte
20
breast cancer cell
20
mononuclear cell
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
astrocyte
19
coronary artery
19
endothelial cell of umbilical vein
19
heart right ventricle
18
HFFc6
18
dendritic cell
18
embryonic stem cell
18
gastrocnemius medialis
18
pancreatic beta cell
18
right atrium auricular region
18
substantia nigra
18
thyroid gland
18
transverse colon
17
HepG2
17
T-helper 2 cell
17
muscle of trunk
17
pancreatic acinar cell
17
pancreatic alpha cell
17
testis
17
tibial artery
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
endothelial cell of lymphatic vessel
16
induced pluripotent stem cell
16
layer of hippocampus
16
mast cell
16
retinal pigment epithelial cell
16
skeletal muscle myoblast
16
skeletal muscle satellite cell
16
skeletal muscle tissue
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
GM12878
15
ascending aorta
15
cerebellum
15
endocardial cell
15
frontal cortex
15
mammary gland epithelial cell
15
neutrophil
15
pancreatic delta cell
14
H9
14
endocrine pancreas
14
prostate gland
14
putamen
13
Peyer's patch
13
aorta
13
bronchial epithelial cell
13
excitatory neuron
13
neurosphere
13
pericyte
13
temporal lobe
12
Ammon's horn
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
mammary epithelial cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuroblastoma cell
12
neuronal stem cell
11
breast epithelium
11
epithelial cell of prostate
11
erythroblast
11
glomerular visceral epithelial cell
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
10
22Rv1
10
Rhabdomyosarcoma
10
adipocyte
10
choroid plexus epithelial cell
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
kidney tubule cell
10
lymphocyte
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
trophoblast
10
type B pancreatic cell
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus