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Clear Filters
Annotation type
  • 4candidate regulatory elements
  • 1accessible chromatin
  • 1eQTL
  • 1gene expression
Annotation Category
  • 5cis-regulatory elements
  • 1Gene expression levels
  • 1Genetic variant effects
Annotation type Category
  • 5DNase-seq
  • 4ChIP-seq
  • 2RNA-seq
Available data
  • 6bed bed3+
  • 1tsv
File set status
  • 7released
Genome assembly (visualization)
  • 5hg19
  • 1GRCh38
Organism
  • 7Homo sapiens
Biosample type
  • 5tissue
  • 1cell line
  • 1primary cell
Biosample term
  • 3tongue
  • 2minor salivary gland
  • 1ACC112
  • 1fibroblast of gingiva
Organ
  • 2838vasculature
  • 2788blood vessel
  • 2784bodily fluid
  • 2779blood
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  • 360connective tissue
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  • 176musculature of body
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  • 47bone element
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  • 45mammary gland
  • 39prostate gland
  • 38lymph node
  • 34penis
  • 31adrenal gland
  • 27small intestine
  • 26gonad
  • 25placenta
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  • 19spinal cord
  • 18lymphatic vessel
  • 16nerve
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  • 10bone marrow
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  • 7breast
  • 7mouth
  • 5trachea
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 1nose
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Life stage
  • 2adult
  • 2embryonic
  • 1unknown
Date released
  • September, 2022
  • 4February, 2021
  • 1January, 2022
  • 1June, 2020
  • 1March, 2024
Software used
  • 4encode-ccres
  • 1macs
  • 1qTLtools
  • 1r
Lab
  • 7AMP-T2D consortium
Project
  • 7AMP
Collection Tags
  • 4ENCODE
  • 1ChIP-Atlas
  • 1GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
RFA
  • 7AMP
month_released!
  • September, 2022

Showing 7 of 7 results

table-tab-iconmatrix-icon

  • FileSet

    DSR762HGG

    released

    Annotation file set: Gene expression summary from GTEx V8 - Gene TPMs for Minor Salivary Gland.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR273PPM

    released

    Annotation file set: minor salivary gland eQTL of studay GTEx from eQTL Catalogue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR421UUQ

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE tongue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR939WYG

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE tongue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR354XIS

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of gingiva
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR454AVC

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE ACC112
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR448VSD

    released

    Annotation file set: Accessible chromatin annotation for Others Tongue from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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