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Schema
Citing CMDGA
Clear Filters
Embeddings type
3
Accessible chromatin
1
Gene expression
Embeddings Category
4
umap
Underlying Assay
2
sciATAC-seq
1
10X snATAC-seq
1
10X snRNA-seq
Available data
4
h5ad
1
mtx
1
tsv
File set status
4
released
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
2
lung
1
islet of Langerhans
1
tissues
Tissue term
2
lung
1
pancreas
1
tissues
Organ
2
lung
1
pancreas
Date released
3
May, 2022
2
August, 2021
2
September, 2021
1
February, 2021
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2020
Lab
2
Xin Sun, UCSD
1
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Project
2
LungMap
1
AMP
1
ENCODE
RFA
2
LungMap2
1
AMP
1
ENCODE3
relevant_life_stage!
adult
Showing 4 of 4 results
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FileSet
DSR838CLG
released
Embeddings file set
: snATAC embedding for raw TN5 insertion counts for each promoter region and cCRE in each cell for multiple tissues
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR514DTZ
released
Embeddings file set
: snRNA-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR722OVR
released
Embeddings file set
: snATAC-seq on non-diseased lung tissue ~30-week-old gestational age, ~3-year-old and ~30-year-old
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR322WJB
released
Embeddings file set
: Islet snATAC-seq from control samples
Lab:
Kyle Gaulton, UCSD
Project:
AMP