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Clear Filters
Annotation type
  • 4variant allelic effects
  • 2accessible chromatin
Annotation Category
  • 4Genetic variant effects
  • 2cis-regulatory elements
Annotation type Category
  • 4ATAC-seq
  • 2DNase-seq
Available data
  • 6bed bed3+
  • 2bigWig
File set status
  • 6released
Genome assembly (visualization)
  • 6hg19
  • 2GRCh38
Organism
  • 6Homo sapiens
Biosample type
  • 5tissue
  • 1cell line
Biosample term
  • 3islet of Langerhans
  • 1EndoC_BH1
  • 1body of pancreas
  • 1pancreas
Organ
  • 19brain
  • 19kidney
  • 15epithelium
  • 15vasculature
  • 11blood vessel
  • 11heart
  • 10connective tissue
  • 10limb
  • 6pancreas
  • 5artery
  • 5musculature of body
  • 3adipose tissue
  • 3liver
  • 3nerve
  • 3ureter
  • 2eye
  • 2vein
  • 1bone element
  • 1bone marrow
  • 1thymus
Life stage
  • 4adult
Date released
  • 47March, 2023
  • 44September, 2022
  • 33May, 2021
  • 31February, 2021
  • 25February, 2024
  • 20January, 2021
  • 18November, 2021
  • 9March, 2020
  • 8August, 2021
  • 7August, 2018
  • 6May, 2020
  • 6October, 2019
  • 4January, 2020
  • 4January, 2022
  • 4June, 2020
  • 3August, 2017
  • 2February, 2020
  • 2November, 2019
  • 1April, 2019
  • 1February, 2023
  • 1January, 2018
  • 1June, 2021
Software used
  • 4deltasvm
Lab
  • 6AMP-T2D consortium
Project
  • 6AMP
Collection Tags
  • 6DGA
  • 2 T2DKP
RFA
  • 6AMP

Showing 6 of 6 results

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  • FileSet

    DSR941LPG

    released

    Annotation file set: Islet of Langerhans accessible chromatin annotation of overlapping ATAC-seq sites from 5 T2D samples with most significant peak selected.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR610XQN

    released

    Annotation file set: Islet of Langerhans accessible chromatin annotation of overlapping ATAC-seq sites from 38 non-diabetic samples with most significant peak selected
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR159BKA

    released

    Annotation file set: Genetic variants with deltaSVM predictions in pancreatic islet ATAC-seq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR871UFR

    released

    Annotation file set: Genetic variants with deltaSVM predictions in EndoB-CH1 beta cell ATAC-seq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR993IYU

    released

    Annotation file set: Genetic variants with deltaSVM predictions in pancreas body DHS-seq
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR848MLC

    released

    Annotation file set: Genetic variants with deltaSVM predictions in pancreas DHS-seq
    Lab: AMP-T2D consortium
    Project: AMP
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