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Assay category
1
DNA accessibility
1
Transcription
Assay
1
DNase-seq
1
pCHi-C
1
total RNA-seq
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
Experiment status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
1
tissue
Organ
68
pancreas
53
liver
26
epithelium
15
blood
15
bodily fluid
9
spleen
3
connective tissue
3
heart
2
brain
2
embryo
1
adipose tissue
1
bone element
1
bone marrow
1
thymus
Life stage
1
adult
1
embryonic
1
unknown
Available data
2
bam
2
bigWig
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
fastq
1
tsv
Platform
1
Illumina HiSeq 4000
1
Illumina NextSeq 500
Run type
1
paired-ended
Read length (nt)
1
36
Library made from
2
DNA
1
RNA
Date released
455
February, 2021
125
August, 2017
23
October, 2018
18
July, 2019
18
June, 2019
14
February, 2023
6
November, 2020
5
August, 2021
4
October, 2019
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Replication type
1
anisogenic
1
isogenic
1
unreplicated
Showing 3 of 3 results
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Experiment
DSR571WJJ
released
total RNA-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR916ELW
released
pCHi-C
of adult endothelial progenitor cell
Homo sapiens
adult endothelial progenitor cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
TSTSR521KIV
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP