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Schema
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Annotation type
5
target gene predictions
2
gene expression
Annotation Category
5
Target gene links
2
Gene expression levels
Annotation type Category
5
ATAC-seq
5
DNase-seq
5
H3K27ac ChIP-Seq
2
RNA-seq
Available data
5
bed bed3+
2
tsv
File set status
7
released
Genome assembly (visualization)
5
hg19
Organism
7
Homo sapiens
Biosample type
3
cell line
3
in vitro differentiated cells
1
primary cell
Biosample term
2
trophoblast cell
1
H1-hESC
1
H7-hESC
1
H9
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
Organ
34
epithelium
33
pancreas
16
connective tissue
11
brain
10
pituitary gland
7
embryo
6
intestine
6
musculature of body
5
large intestine
5
skin of body
4
blood
4
bodily fluid
4
heart
4
lung
3
adipose tissue
3
blood vessel
3
extraembryonic component
3
limb
3
liver
3
vasculature
2
adrenal gland
2
artery
2
mammary gland
2
prostate gland
2
stomach
2
uterus
1
breast
1
gonad
1
lymph node
1
ovary
1
penis
1
placenta
1
small intestine
1
spinal cord
1
spleen
1
thymus
1
thyroid gland
1
vein
Date released
81
September, 2022
53
February, 2021
51
February, 2024
10
June, 2020
8
August, 2021
7
May, 2021
2
November, 2021
1
August, 2017
1
March, 2020
1
October, 2022
Software used
5
abc
2
r
Lab
5
Jesse Engreitz, Stanford University
2
AMP-T2D consortium
Project
7
AMP
Collection Tags
5
DGA
2
AMP
RFA
7
AMP
Showing 7 of 7 results
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Download
FileSet
DSR857WVQ
released
Annotation file set
: Gene expression annotation of mesodermal cell_papcemaker intermediate (PI) ISL1+HCN4+ on day 6 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR314VSK
released
Annotation file set
: Gene expression annotation of mesodermal cell_Lineage marker-negative ISL1+Lineage marker- on day 6 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486DHW
released
Annotation file set
: enhancer-gene predicton of H7 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR630TXR
released
Annotation file set
: enhancer-gene predicton of trophoblast_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR118KLN
released
Annotation file set
: enhancer-gene predicton of H9-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR922GBW
released
Annotation file set
: enhancer-gene predicton of H1-hESC-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR250DDG
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP