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Annotation type
2
differential activity
1
candidate regulatory elements
1
gene expression
1
target gene predictions
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ATAC-seq
2
RNA-seq
File set status
5
released
Genome assembly (visualization)
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
5
visceral fat
Organ
5
adipose tissue
5
artery
5
blood vessel
5
connective tissue
5
liver
5
musculature of body
5
vasculature
Life stage
5
adult
Date released
120
September, 2022
109
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
March, 2025
10
May, 2020
10
May, 2024
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
5
October, 2025
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
January, 2025
2
July, 2025
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Software used
2
dreamlet
1
archr
1
scanpy
1
sce2g
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
5
STARNET
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR485442
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human visceral fat, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR352861
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human visceral fat, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR546806
released
Annotation file set
: The dataset contains gene expression levels in human visceral fat, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR611486
released
Annotation file set
: The dataset contains cCRE–target gene links in human visceral fat, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR388902
released
Annotation file set
: The dataset contains candidate cis-regulatory elements (cCREs) in human visceral fat, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP