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Annotation type
2
differential activity
1
candidate regulatory elements
1
gene expression
1
target gene predictions
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ATAC-seq
2
RNA-seq
File set status
5
released
Genome assembly (visualization)
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
5
skeletal muscle
Organ
5
adipose tissue
5
artery
5
blood vessel
5
connective tissue
5
liver
5
musculature of body
5
vasculature
Life stage
5
adult
Date released
204
September, 2022
92
February, 2021
15
February, 2024
12
July, 2025
11
November, 2021
9
March, 2020
6
February, 2020
6
June, 2020
6
May, 2021
5
January, 2020
5
March, 2025
5
May, 2020
5
October, 2025
3
August, 2017
3
May, 2022
3
October, 2022
2
March, 2024
2
May, 2019
1
August, 2021
1
January, 2022
1
October, 2019
Software used
2
dreamlet
1
archr
1
scanpy
1
sce2g
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
5
STARNET
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR102339
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human skeletal muscle, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR553091
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human skeletal muscle, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR442078
released
Annotation file set
: The dataset contains gene expression levels in human skeletal muscle, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR215161
released
Annotation file set
: The dataset contains cCRE–target gene links in human skeletal muscle, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR171881
released
Annotation file set
: The dataset contains candidate cis-regulatory elements (cCREs) in human skeletal muscle, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP