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Annotation type
2
differential activity
1
candidate regulatory elements
1
gene expression
1
target gene predictions
Annotation Category
2
Gene expression levels
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ATAC-seq
2
RNA-seq
File set status
5
released
Genome assembly (visualization)
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
5
artery
Organ
5
adipose tissue
5
artery
5
blood vessel
5
connective tissue
5
liver
5
musculature of body
5
vasculature
Life stage
5
adult
Date released
2635
February, 2025
75
September, 2022
49
February, 2021
35
September, 2023
17
February, 2024
16
January, 2020
15
May, 2020
12
March, 2020
9
March, 2025
6
June, 2020
6
November, 2021
5
February, 2020
5
October, 2025
4
February, 2023
4
March, 2023
4
October, 2022
3
April, 2020
3
January, 2022
3
May, 2021
3
May, 2024
3
November, 2019
2
October, 2019
1
August, 2017
1
August, 2021
1
March, 2024
1
May, 2019
Software used
2
dreamlet
1
archr
1
scanpy
1
sce2g
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
5
STARNET
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR936629
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human artery, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR849587
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human artery, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR007425
released
Annotation file set
: The dataset contains gene expression levels in human artery, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR668686
released
Annotation file set
: The dataset contains cCRE–target gene links in human artery, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR673078
released
Annotation file set
: The dataset contains candidate cis-regulatory elements (cCREs) in human artery, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP