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Clear Filters
Annotation type
  • 3accessible chromatin
  • 3target gene predictions
Annotation Category
  • 3Target gene links
  • 3cis-regulatory elements
Annotation type Category
  • 3ATAC-seq
  • 3Capture-C
Available data
  • 3bed bed3+
File set status
  • 6released
Genome assembly (visualization)
  • 3hg19
Organism
  • 6Homo sapiens
Biosample type
  • 5in vitro differentiated cells
  • 1stem cell
Biosample term
  • 1ESC dervived hypothalamic neuron (arcuate nucleus)
  • 1ESC dervived hypothalamic progenitor (arcuate nucleus)
  • 1Progenitor cell of Hypothalamus (neural progenitor cell)
  • 1embryonic stem cell
  • 1neuron cell of Hypothalamus (neuron)
  • 1undifferentiated ESC (H9 cell line)
Organ
  • 3brain
  • connective tissue
Date released
  • 3November, 2022
  • 3September, 2023
Software used
  • 3chicago
  • 3macs
Lab
  • 6Struan F.A. Grant, CHOP
Project
  • 6AMP
Collection Tags
  • 3AMP
  • 3CMDGA
RFA
  • 6AMP2
organ_slims!
  • connective tissue

Showing 6 of 6 results

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  • FileSet

    DSR416XCR

    released

    Annotation file set: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Neuron (1frag and 4 frag)
    Lab: Struan F.A. Grant, CHOP
    Project: AMP
  • FileSet

    DSR383OMT

    released

    Annotation file set: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Progenitor (1frag and 4 frag)
    Lab: Struan F.A. Grant, CHOP
    Project: AMP
  • FileSet

    DSR843RXV

    released

    Annotation file set: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
    Lab: Struan F.A. Grant, CHOP
    Project: AMP
  • FileSet

    DSR817DDX

    released

    Annotation file set: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Progenitor).
    Lab: Struan F.A. Grant, CHOP
    Project: AMP
  • FileSet

    DSR593BUS

    released

    Annotation file set: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Hypothalamic Neuron).
    Lab: Struan F.A. Grant, CHOP
    Project: AMP
  • FileSet

    DSR455VRI

    released

    Annotation file set: Accessible chromatin of an established embryonic stem cell derived hypothalamic-like neuron model across three stages of in vitro differentiation (Embryonic Stem Cell).
    Lab: Struan F.A. Grant, CHOP
    Project: AMP
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