Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Clear Filters
Annotation type
5
caQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
4
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
tissue
Biosample term
1
endothelial cell
1
liver
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
connective tissue
1
epithelium
1
liver
Date released
4
October, 2022
1
May, 2022
Software used
2416
macs
2251
r
976
chromhmm
798
encode-ccres
219
abc
131
qTLtools
121
deseq2
120
deltasvm
31
cicero
25
nospecificsoft_customcode
24
seurat
23
chicago
22
gtex_eqtl:V8
22
gtex_finemapping_eQTL:caveman
22
gtex_finemapping_eQTL:caviar
22
gtex_finemapping_eQTL:dapg
16
samtools
15
limix
14
hiccups
13
matrix-eQTL
10
deeptools
10
umitools
9
rasqual
9
salmon
5
eigenmt
4
unknown
3
fastqtl
3
minfi
3
sqtlseeker
2
combined S2G strategy
2
mpraflow
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
bimbam
1
cisgenome
1
e-range
1
emmax
1
haploview
1
mach2qtl
1
peer
1
pepatac
1
snap
1
spp
Lab
4
Stephen Parker, UMich
1
Karen Mohlke, UNC
Project
5
AMP
Collection Tags
5
DGA
4
T2DKP
1
AMP
RFA
4
AMP2
1
AMP
organ_slims!
connective tissue
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP