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Annotation type
6
differential activity
Annotation Category
3
Gene expression levels
3
cis-regulatory elements
Annotation type Category
3
ATAC-seq
3
RNA-seq
File set status
6
released
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
2
artery
2
liver
2
visceral fat
Organ
2
adipose tissue
2
artery
2
blood vessel
2
connective tissue
2
liver
musculature of body
2
vasculature
Life stage
6
adult
Date released
6
October, 2025
Software used
2514
macs
2239
r
960
chromhmm
760
encode-ccres
241
abc
154
qTLtools
130
deseq2
129
deltasvm
32
cicero
27
chicago
26
nospecificsoft_customcode
25
seurat
22
gtex_eqtl:V8
22
gtex_finemapping_eQTL:caveman
22
gtex_finemapping_eQTL:caviar
22
gtex_finemapping_eQTL:dapg
15
limix
13
matrix-eQTL
13
samtools
12
hiccups
9
rasqual
9
salmon
8
fastqtl
7
deeptools
7
umitools
6
dreamlet
5
peer
5
unknown
4
eigenmt
3
archr
3
mach2qtl
3
minfi
3
scanpy
3
sce2g
3
sqtlseeker
2
combined S2G strategy
2
emmax
2
mpraflow
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
bimbam
1
cisgenome
1
e-range
1
epacts
1
fast-lmm
1
haploview
1
pepatac
1
probabel
1
snap
1
spp
Lab
6
AMP-T2D consortium
Project
6
AMP
Collection Tags
6
STARNET
RFA
6
AMP
organ_slims!
musculature of body
Showing 6 of 6 results
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FileSet
DSR485442
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human visceral fat, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR241218
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human liver, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR936629
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human artery, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR352861
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human visceral fat, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR505915
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human liver, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR849587
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human artery, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP