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Clear Filters
Annotation type
  • 8chromatin state
  • 1binding sites
Annotation Category
  • 9cis-regulatory elements
Annotation type Category
  • 9ChIP-seq
Available data
  • 8bed bed9
  • 2bigBed bed9
  • 1bed bed3+
  • 1bigWig
File set status
  • 9released
Genome assembly (visualization)
  • 9hg19
  • 8GRCh38
Organism
  • 9Homo sapiens
Biosample type
  • 6tissue
  • 3primary cell
Biosample term
  • 3coronary artery
  • 3tibial artery
  • 2fibroblast of pulmonary artery
  • 1pulmonary artery endothelial cell
Organ
  • 79kidney
  • 78brain
  • 75lung
  • 75musculature of body
  • 60intestine
  • 59connective tissue
  • 58epithelium
  • 51heart
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  • 39skin of body
  • 37large intestine
  • 37vasculature
  • 34extraembryonic component
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  • 2lymphatic vessel
  • 2tongue
  • 2urinary bladder
  • 2vagina
  • 1nose
Life stage
  • 6adult
  • 2unknown
Date released
  • 6September, 2022
  • 1May, 2019
  • 1May, 2020
  • 1October, 2022
Software used
  • 21macs
  • 20r
  • 9chromhmm
  • 6qTLtools
  • 4deltasvm
  • 4encode-ccres
  • 3deseq2
  • 2abc
  • 2gtex_eqtl:V8
  • 2gtex_finemapping_eQTL:caveman
  • 2gtex_finemapping_eQTL:caviar
  • 2gtex_finemapping_eQTL:dapg
  • 2rasqual
Lab
  • 9AMP-T2D consortium
Project
  • 9AMP
Collection Tags
  • 6EpiMap
  • 1ENCODE
RFA
  • 9AMP

Showing 9 of 9 results

table-tab-iconmatrix-icon

  • FileSet

    DSR175VCZ

    released

    Annotation file set: Binding sites annotation for fibroblast of pulmonary artery (HPAF) for GOLDENPATH ENCODE DCC
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR520FED

    released

    Annotation file set: Chromatin states for BSS01838 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR512ACD

    released

    Annotation file set: Chromatin states for BSS01837 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR860ZEJ

    released

    Annotation file set: Chromatin states for BSS00345 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR288KBX

    released

    Annotation file set: Chromatin states for BSS01465 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR823JJW

    released

    Annotation file set: Chromatin states for BSS00243 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR679HDX

    released

    Annotation file set: Chromatin states for BSS00242 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR157HZX

    released

    Annotation file set: ChromHMM 18-state model for tibial artery from 26 ENCODE ChIP-seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR716IKT

    released

    Annotation file set: ChromHMM 4-state model for coronary artery from ENCODE ChIP-seq data
    Lab: AMP-T2D consortium
    Project: AMP
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