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Clear Filters
Annotation type
  • 5eQTL
  • 1Fine-mapped variants
Annotation Category
  • 5Genetic variant effects
  • 1cis-regulatory elements
Annotation type Category
  • 6RNA-seq
Available data
  • 3bed bed3+
  • 3tsv
File set status
  • 6released
Genome assembly (visualization)
  • 3GRCh38
Organism
  • 6Homo sapiens
Biosample type
  • 6tissue
Biosample term
  • 3internal thoracic artery
  • 1abdominal aorta artery
  • 1coronary artery
  • 1tibial artery
Organ
  • 17brain
  • 17connective tissue
  • 10pancreas
  • 9adipose tissue
  • 9blood vessel
  • 9vasculature
  • 7musculature of body
  • 6artery
  • 6blood
  • 6bodily fluid
  • 4liver
  • 3esophagus
  • 3gonad
  • 3heart
  • 3intestine
  • 3skin of body
  • 2large intestine
  • 2limb
  • 2testis
  • 1adrenal gland
  • 1breast
  • 1epithelium
  • 1extraembryonic component
  • 1eye
  • 1kidney
  • 1lung
  • 1mouth
  • 1nerve
  • 1ovary
  • 1pituitary gland
  • 1placenta
  • 1prostate gland
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1thyroid gland
  • 1uterus
  • 1vagina
Life stage
  • 3adult
Date released
  • 3January, 2022
  • 3March, 2025
Software used
  • 21macs
  • 20r
  • 9chromhmm
  • 6qTLtools
  • 4deltasvm
  • 4encode-ccres
  • 3deseq2
  • 2abc
  • 2gtex_eqtl:V8
  • 2gtex_finemapping_eQTL:caveman
  • 2gtex_finemapping_eQTL:caviar
  • 2gtex_finemapping_eQTL:dapg
  • 2rasqual
Lab
  • 6AMP-T2D consortium
Project
  • 6AMP
Collection Tags
  • 3STARNET
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
RFA
  • 6AMP

Showing 6 of 6 results

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  • FileSet

    DSR245ZTT

    released

    Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in internal thoracic artery
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR787ERY

    released

    Annotation file set: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in internal thoracic artery
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR104PTF

    released

    Annotation file set: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in internal thoracic artery
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR599OOZ

    released

    Annotation file set: artery tibial eQTL of studay GTEx from eQTL Catalogue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR448FZU

    released

    Annotation file set: artery coronary eQTL of studay GTEx from eQTL Catalogue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR375QMG

    released

    Annotation file set: artery aorta eQTL of studay GTEx from eQTL Catalogue
    Lab: AMP-T2D consortium
    Project: AMP
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