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Annotation type
2
differential activity
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
RNA-seq
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
artery
Organ
2
adipose tissue
2
artery
2
blood vessel
2
connective tissue
2
liver
2
musculature of body
2
vasculature
Life stage
2
adult
Date released
2
October, 2025
Software used
62
r
43
macs
30
chromhmm
20
encode-ccres
12
deseq2
9
deltasvm
9
qTLtools
4
salmon
3
abc
3
gtex_eqtl:V8
3
gtex_finemapping_eQTL:caveman
3
gtex_finemapping_eQTL:caviar
3
gtex_finemapping_eQTL:dapg
3
rasqual
2
dreamlet
2
hiccups
1
archr
1
nospecificsoft_customcode
1
scanpy
1
sce2g
Lab
2
AMP-T2D consortium
Project
2
AMP
Collection Tags
2
STARNET
RFA
2
AMP
Showing 2 of 2 results
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FileSet
DSR936629
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human artery, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR849587
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human artery, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP