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Annotation type
2
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
1
bed bed9
1
bed bed9+
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
stromal cell of bone marrow
Organ
79
kidney
78
brain
75
lung
75
musculature of body
60
intestine
59
connective tissue
58
epithelium
51
heart
50
limb
46
bodily fluid
44
blood
39
skin of body
37
large intestine
37
vasculature
34
extraembryonic component
30
blood vessel
29
embryo
24
stomach
20
small intestine
18
liver
18
mammary gland
17
pancreas
17
placenta
16
bone element
14
adrenal gland
13
prostate gland
13
ureter
12
penis
11
eye
11
thymus
10
adipose tissue
10
lymph node
9
artery
9
gonad
9
spinal cord
7
esophagus
6
spleen
6
vein
5
lymphoid tissue
5
testis
5
uterus
4
mouth
4
nerve
4
ovary
4
thyroid gland
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Life stage
1
child
1
unknown
Date released
1
May, 2022
1
September, 2022
Software used
6
macs
2
chromhmm
2
r
1
chicago
1
cicero
1
encode-ccres
Lab
2
AMP-T2D consortium
Project
2
AMP
Collection Tags
1
BLUEPRINT
1
EpiMap
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR315JBI
released
Annotation file set
: Chromatin states for BSS01661 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR180LXT
released
Annotation file set
: Chromatin state of CD34-negative, CD41-positive, CD42-positive megakaryocyte cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP