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Schema
Clear Filters
Annotation type
3
candidate regulatory elements
2
chromatin state
1
accessible chromatin
1
eQTL
1
target gene predictions
Annotation Category
6
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
5
ChIP-seq
5
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
RNA-seq
Available data
6
bed bed3+
2
bed bed9
File set status
8
released
Genome assembly (visualization)
7
hg19
3
GRCh38
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
7
breast epithelium
1
breast
Organ
2835
vasculature
2807
bodily fluid
2801
blood
2791
blood vessel
2653
vein
594
epithelium
352
connective tissue
328
brain
300
kidney
250
musculature of body
176
intestine
171
pancreas
170
lung
164
heart
151
embryo
147
limb
134
skin of body
121
liver
106
large intestine
90
eye
80
extraembryonic component
75
adipose tissue
73
uterus
71
stomach
64
artery
59
mammary gland
57
bone element
51
prostate gland
46
lymph node
46
small intestine
44
adrenal gland
44
penis
41
placenta
38
ureter
32
gonad
29
esophagus
27
thymus
26
spinal cord
21
spleen
17
lymphatic vessel
17
nerve
17
testis
14
ovary
14
thyroid gland
13
lymphoid tissue
12
bronchus
12
pituitary gland
12
skeleton
11
bone marrow
10
mouth
8
breast
5
tongue
5
trachea
5
urinary bladder
5
vagina
2
nose
Life stage
5
adult
Date released
3
February, 2021
2
September, 2022
1
January, 2022
1
June, 2020
1
May, 2021
Software used
r
3
encode-ccres
2
chromhmm
1
abc
1
macs
1
qTLtools
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
Collection Tags
3
ENCODE
2
EpiMap
1
ChIP-Atlas
1
DGA
1
T1D
1
T2D
1
eQTLCatalogue
RFA
8
AMP
software_used.software.name!
r
Showing 8 of 8 results
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Download
FileSet
DSR513JAX
released
Annotation file set
: Chromatin states for BSS00146 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR558QXI
released
Annotation file set
: Chromatin states for BSS00145 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR266AND
released
Annotation file set
: breast eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR751KRC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR027WWM
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR278EXR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE breast epithelium
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR097EPN
released
Annotation file set
: enhancer-gene predicton of breast_epithelium-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR042SCF
released
Annotation file set
: Accessible chromatin annotation for Breast Breast epithelium from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP