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Schema
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Annotation type
2
accessible chromatin
2
binding sites
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
1
snATAC-seq
Available data
5
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
4
bronchial epithelial cell
1
club cell
Organ
270
epithelium
130
connective tissue
98
brain
73
pancreas
67
eye
64
bodily fluid
62
blood
58
kidney
57
vasculature
49
liver
43
blood vessel
40
musculature of body
40
skin of body
37
heart
35
embryo
34
intestine
28
bone element
24
limb
22
lymph node
21
artery
21
lung
21
mammary gland
20
large intestine
20
prostate gland
16
extraembryonic component
13
penis
10
adipose tissue
9
placenta
9
stomach
8
gonad
8
skeleton
8
uterus
7
adrenal gland
6
bone marrow
6
lymphatic vessel
5
bronchus
5
testis
5
trachea
4
esophagus
4
thymus
4
ureter
4
vein
3
lymphoid tissue
3
nerve
3
small intestine
3
spinal cord
3
spleen
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Date released
3
February, 2021
1
June, 2020
1
November, 2021
Software used
5
macs
4
r
2
chromhmm
2
encode-ccres
1
abc
1
deltasvm
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
1
ENCODE
Collection Tags
4
ChIP-Atlas
1
AMP
1
T2DKP
RFA
4
AMP
1
ENCODE3
Showing 5 of 5 results
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Download
FileSet
DSR678WWH
released
Annotation file set
: Accessible chromatin annotation of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR655FKJ
released
Annotation file set
: Histone modifications annotation for Lung Bronchial_epithelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR984CXZ
released
Annotation file set
: Binding sites annotation for Lung HBEC3-KT from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR855TRJ
released
Annotation file set
: Binding sites annotation for Lung Bronchial_epithelial_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR613FQC
released
Annotation file set
: Accessible chromatin annotation for Lung Bronchial epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP