Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
Clear Filters
Annotation type
  • 1caQTL
Annotation Category
  • 1Genetic variant effects
Annotation type Category
  • 1snATAC-seq
Available data
  • 1bed bed3+
File set status
  • 1released
Genome assembly (visualization)
  • 1hg19
Organism
  • 1Homo sapiens
Biosample type
  • 1primary cell
Biosample term
  • 1mesenchymal stem cell
Organ
  • 2musculature of body
  • 1connective tissue
  • 1epithelium
  • 1liver
Date released
  • 1October, 2022
Software used
  • 135r
  • 130macs
  • 59chromhmm
  • 40encode-ccres
  • 31abc
  • 17qTLtools
  • 16deltasvm
  • 12deseq2
  • 5fastqtl
  • 4chicago
  • 4peer
  • 2deeptools
  • 2gtex_eqtl:V8
  • 2gtex_finemapping_eQTL:caveman
  • 2gtex_finemapping_eQTL:caviar
  • 2gtex_finemapping_eQTL:dapg
  • 2mach2qtl
  • 2nospecificsoft_customcode
  • 2rasqual
  • 2samtools
  • 2umitools
  • 1cicero
  • 1eigenmt
  • 1emmax
  • 1epacts
  • 1fast-lmm
  • 1matrix-eQTL
  • 1probabel
  • 1seurat
  • 1unknown
Lab
  • 1Stephen Parker, UMich
Project
  • 1AMP
Collection Tags
  • 1 T2DKP
  • 1DGA
RFA
  • 1AMP2

Showing 1 of 1 results

table-tab-iconmatrix-icon

  • FileSet

    DSR450DUL

    released

    Annotation file set: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
    Lab: Stephen Parker, UMich
    Project: AMP
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego