Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Clear Filters
Annotation type
2
caQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
2
endothelial cell
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
Date released
1
February, 2023
1
October, 2022
Software used
367
r
270
macs
68
deseq2
59
abc
58
chromhmm
52
encode-ccres
41
deltasvm
13
cicero
12
seurat
9
salmon
7
samtools
2
hiccups
2
matrix-eQTL
2
rasqual
1
deeptools
1
eigenmt
1
qTLtools
1
umitools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
Collection Tags
1
T2DKP
1
CMDGA
1
DGA
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR375DYB
released
Annotation file set
: Chromatin accessibility QTLs in endothelial cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP