Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
Clear Filters
Annotation type
  • 7chromatin state
Annotation Category
  • 7cis-regulatory elements
Annotation type Category
  • 7ChIP-seq
Available data
  • 7bed bed9
File set status
  • 7released
Genome assembly (visualization)
  • 7GRCh38
  • 7hg19
Organism
  • 7Homo sapiens
Biosample type
  • 6tissue
  • 1primary cell
Biosample term
  • 2esophagus
  • 2esophagus muscularis mucosa
  • 2esophagus squamous epithelium
  • 1epithelial cell of esophagus
Organ
  • 79kidney
  • 78brain
  • 75lung
  • 75musculature of body
  • 60intestine
  • 59connective tissue
  • 58epithelium
  • 51heart
  • 50limb
  • 46bodily fluid
  • 44blood
  • 39skin of body
  • 37large intestine
  • 37vasculature
  • 34extraembryonic component
  • 30blood vessel
  • 29embryo
  • 24stomach
  • 20small intestine
  • 18liver
  • 18mammary gland
  • 17pancreas
  • 17placenta
  • 16bone element
  • 14adrenal gland
  • 13prostate gland
  • 13ureter
  • 12penis
  • 11eye
  • 11thymus
  • 10adipose tissue
  • 10lymph node
  • 9artery
  • 9gonad
  • 9spinal cord
  • 7esophagus
  • 6spleen
  • 6vein
  • 5lymphoid tissue
  • 5testis
  • 5uterus
  • 4mouth
  • 4nerve
  • 4ovary
  • 4thyroid gland
  • 3skeleton
  • 2bone marrow
  • 2breast
  • 2bronchus
  • 2lymphatic vessel
  • 2tongue
  • 2urinary bladder
  • 2vagina
  • 1nose
Life stage
  • 6adult
  • 1unknown
Date released
  • 7September, 2022
Software used
  • 16r
  • 10encode-ccres
  • 7chromhmm
  • 4macs
  • 3qTLtools
  • 2abc
  • 2deltasvm
  • 1nospecificsoft_customcode
Lab
  • 7AMP-T2D consortium
Project
  • 7AMP
Collection Tags
  • 7EpiMap
RFA
  • 7AMP

Showing 7 of 7 results

table-tab-iconmatrix-icon

  • FileSet

    DSR901NXJ

    released

    Annotation file set: Chromatin states for BSS00326 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR178JVZ

    released

    Annotation file set: Chromatin states for BSS00325 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR139POU

    released

    Annotation file set: Chromatin states for BSS00322 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR233DGH

    released

    Annotation file set: Chromatin states for BSS00321 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR929IPZ

    released

    Annotation file set: Chromatin states for BSS00307 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR225TFA

    released

    Annotation file set: Chromatin states for BSS00318 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR992LDH

    released

    Annotation file set: Chromatin states for BSS00316 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego