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Clear Filters
Annotation type
  • 8chromatin state
  • 1binding sites
Annotation Category
  • 9cis-regulatory elements
Annotation type Category
  • 9ChIP-seq
Available data
  • 8bed bed9
  • 1bed bed3+
File set status
  • 9released
Genome assembly (visualization)
  • 9hg19
  • 8GRCh38
Organism
  • 9Homo sapiens
Biosample type
  • 7tissue
  • 2cell line
Biosample term
  • 4ovary
  • 3testis
  • 2NT2-D1 cell
Organ
  • 79kidney
  • 78brain
  • 75lung
  • 75musculature of body
  • 60intestine
  • 59connective tissue
  • 58epithelium
  • 51heart
  • 50limb
  • 46bodily fluid
  • 44blood
  • 39skin of body
  • 37large intestine
  • 37vasculature
  • 34extraembryonic component
  • 30blood vessel
  • 29embryo
  • 24stomach
  • 20small intestine
  • 18liver
  • 18mammary gland
  • 17pancreas
  • 17placenta
  • 16bone element
  • 14adrenal gland
  • 13prostate gland
  • 13ureter
  • 12penis
  • 11eye
  • 11thymus
  • 10adipose tissue
  • 10lymph node
  • 9artery
  • 9gonad
  • 9spinal cord
  • 7esophagus
  • 6spleen
  • 6vein
  • 5lymphoid tissue
  • 5testis
  • 5uterus
  • 4mouth
  • 4nerve
  • 4ovary
  • 4thyroid gland
  • 3skeleton
  • 2bone marrow
  • 2breast
  • 2bronchus
  • 2lymphatic vessel
  • 2tongue
  • 2urinary bladder
  • 2vagina
  • 1nose
Life stage
  • 5adult
  • 2embryonic
  • 1unknown
Date released
  • 8September, 2022
  • 1October, 2022
Software used
  • 18r
  • 9chromhmm
  • 9encode-ccres
  • 8macs
  • 3qTLtools
  • 2abc
  • 1nospecificsoft_customcode
Lab
  • 9AMP-T2D consortium
Project
  • 9AMP
Collection Tags
  • 8EpiMap
  • 1ENCODE
RFA
  • 9AMP

Showing 9 of 9 results

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  • FileSet

    DSR209NBR

    released

    Annotation file set: Binding sites annotation for NT2-D1 cell (NT2-D1) for GOLDENPATH ENCODE DCC
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR549AED

    released

    Annotation file set: Chromatin states for BSS01386 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR845ZVQ

    released

    Annotation file set: Chromatin states for BSS01719 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR211VUO

    released

    Annotation file set: Chromatin states for BSS01718 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR666MOR

    released

    Annotation file set: Chromatin states for BSS01715 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR341FQS

    released

    Annotation file set: Chromatin states for BSS01403 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR269FHF

    released

    Annotation file set: Chromatin states for BSS01402 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR455UGR

    released

    Annotation file set: Chromatin states for BSS01401 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR843OMB

    released

    Annotation file set: Chromatin states for BSS01399 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
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