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Annotation type
2
differential activity
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
RNA-seq
File set status
2
released
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
2
liver
Organ
2
adipose tissue
2
artery
2
blood vessel
2
connective tissue
2
liver
2
musculature of body
2
vasculature
Life stage
2
adult
Date released
2
October, 2025
Software used
49
macs
47
r
18
chromhmm
9
encode-ccres
9
salmon
4
abc
4
deltasvm
4
qTLtools
3
deseq2
2
dreamlet
1
archr
1
bimbam
1
chicago
1
cisgenome
1
e-range
1
eigenmt
1
emmax
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
haploview
1
hiccups
1
mach2qtl
1
nospecificsoft_customcode
1
rasqual
1
scanpy
1
sce2g
1
snap
1
unknown
Lab
2
AMP-T2D consortium
Project
2
AMP
Collection Tags
2
STARNET
RFA
2
AMP
Showing 2 of 2 results
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FileSet
DSR241218
released
Annotation file set
: The dataset contains differentially accessible cCREs between CAD and control in human liver, derived from STARNET ATAC-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR505915
released
Annotation file set
: The dataset contains differentially expressed genes between CAD and control in human liver, derived from STARNET RNA-seq data (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP