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Annotation type
3
eQTL
1
Fine-mapped variants
Annotation Category
3
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
4
RNA-seq
Available data
3
tsv
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
liver
Organ
17
brain
17
connective tissue
10
pancreas
9
adipose tissue
9
blood vessel
9
vasculature
7
musculature of body
6
artery
6
blood
6
bodily fluid
4
liver
3
esophagus
3
gonad
3
heart
3
intestine
3
skin of body
2
large intestine
2
limb
2
testis
1
adrenal gland
1
breast
1
epithelium
1
extraembryonic component
1
eye
1
kidney
1
lung
1
mouth
1
nerve
1
ovary
1
pituitary gland
1
placenta
1
prostate gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thyroid gland
1
uterus
1
vagina
Life stage
3
adult
Date released
3
March, 2025
1
January, 2022
Software used
49
macs
47
r
18
chromhmm
9
encode-ccres
9
salmon
4
abc
4
deltasvm
4
qTLtools
3
deseq2
1
bimbam
1
chicago
1
cisgenome
1
e-range
1
eigenmt
1
emmax
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
haploview
1
hiccups
1
mach2qtl
1
nospecificsoft_customcode
1
rasqual
1
snap
1
unknown
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
3
STARNET
1
T1D
1
T2D
1
eQTLCatalogue
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR466QZJ
released
Annotation file set
: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in liver
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR307KJS
released
Annotation file set
: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in liver
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR671DTQ
released
Annotation file set
: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in liver
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR336ZEK
released
Annotation file set
: liver eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP