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Annotation type
7
target gene predictions
Annotation Category
7
Target gene links
Annotation type Category
7
ATAC-seq
4
DNase-seq
4
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
3
GRCh38
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
cell line
Biosample term
2
type II pneumocyte
1
A549
1
IMR-90
1
PC-9
1
fibroblast of lung
1
type I pneumocyte
Organ
59
epithelium
31
connective tissue
14
intestine
14
pancreas
11
brain
10
pituitary gland
10
skin of body
9
musculature of body
8
large intestine
7
heart
7
lung
6
adrenal gland
6
stomach
5
embryo
5
mammary gland
4
blood
4
bodily fluid
4
liver
4
vasculature
3
adipose tissue
3
blood vessel
3
extraembryonic component
3
limb
3
small intestine
3
uterus
2
artery
2
esophagus
2
gonad
2
ovary
2
prostate gland
2
thyroid gland
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
penis
1
placenta
1
spinal cord
1
spleen
1
thymus
1
vein
Date released
4
May, 2021
3
November, 2021
Software used
141
r
75
chromhmm
61
encode-ccres
21
macs
7
abc
1
deltasvm
1
nospecificsoft_customcode
1
qTLtools
Lab
4
Jesse Engreitz, Stanford University
3
Bing Ren, UCSD
Project
4
AMP
3
ENCODE
Collection Tags
4
DGA
3
AMP
3
T2DKP
RFA
4
AMP
3
ENCODE3
Showing 7 of 7 results
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Download
FileSet
DSR588HKS
released
Annotation file set
: Target gene predictions of Alverolar Type 2,Immune from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR775ZRO
released
Annotation file set
: Target gene predictions of Alveolar Type 2 (AT2) Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR923OSI
released
Annotation file set
: Target gene predictions of Alveolar Type 1 (AT1) Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR988JBC
released
Annotation file set
: enhancer-gene predicton of PC-9-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR895REE
released
Annotation file set
: enhancer-gene predicton of IMR90-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR319ZJZ
released
Annotation file set
: enhancer-gene predicton of fibroblast_of_lung-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR510YWQ
released
Annotation file set
: enhancer-gene predicton of A549_treated_with_ethanol_0.02_percent_for_1_hour-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP