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Annotation type
5
gene expression
Annotation Category
5
Gene expression levels
Annotation type Category
5
snRNA-seq
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
2
skeletal muscle fiber
1
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Organ
5
musculature of body
2
connective tissue
1
epithelium
Date released
5
February, 2024
Software used
147
r
78
encode-ccres
75
chromhmm
40
macs
9
abc
7
deltasvm
7
qTLtools
5
deeptools
5
samtools
5
umitools
3
deseq2
2
eigenmt
2
gtex_eqtl:V8
2
gtex_finemapping_eQTL:caveman
2
gtex_finemapping_eQTL:caviar
2
gtex_finemapping_eQTL:dapg
2
hiccups
2
rasqual
1
matrix-eQTL
1
nospecificsoft_customcode
Lab
5
Stephen Parker, UMich
Project
5
AMP
Collection Tags
5
T2DKP
5
DGA
RFA
5
AMP2
Showing 5 of 5 results
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FileSet
DSR522PJU
released
Annotation file set
: Cell type gene expression mean TPM and bw of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR928HZI
released
Annotation file set
: Cell type gene expression mean TPM and bw of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR040MIE
released
Annotation file set
: Cell type gene expression mean TPM and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR985XYU
released
Annotation file set
: Cell type gene expression mean TPM and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP