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Annotation type
2
caQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
1
epithelium
1
liver
Date released
2
October, 2022
Software used
147
r
78
encode-ccres
75
chromhmm
40
macs
9
abc
7
deltasvm
7
qTLtools
5
deeptools
5
samtools
5
umitools
3
deseq2
2
eigenmt
2
gtex_eqtl:V8
2
gtex_finemapping_eQTL:caveman
2
gtex_finemapping_eQTL:caviar
2
gtex_finemapping_eQTL:dapg
2
hiccups
2
rasqual
1
matrix-eQTL
1
nospecificsoft_customcode
Lab
2
Stephen Parker, UMich
Project
2
AMP
Collection Tags
2
T2DKP
2
DGA
RFA
2
AMP2
Showing 2 of 2 results
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Download
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP