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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
ATAC-seq
File set status
1
released
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
1
skeletal muscle
Organ
1
adipose tissue
1
artery
1
blood vessel
1
connective tissue
1
liver
1
musculature of body
1
vasculature
Life stage
1
adult
Date released
1
October, 2025
Software used
147
r
78
encode-ccres
75
chromhmm
44
macs
15
qTLtools
9
abc
7
deltasvm
5
deeptools
5
samtools
5
umitools
3
deseq2
2
dreamlet
2
eigenmt
2
gtex_eqtl:V8
2
gtex_finemapping_eQTL:caveman
2
gtex_finemapping_eQTL:caviar
2
gtex_finemapping_eQTL:dapg
2
hiccups
2
rasqual
1
archr
1
matrix-eQTL
1
nospecificsoft_customcode
1
scanpy
1
sce2g
Lab
1
AMP-T2D consortium
Project
1
AMP
Collection Tags
1
STARNET
RFA
1
AMP
Showing 1 of 1 results
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FileSet
DSR215161
released
Annotation file set
: The dataset contains cCRE–target gene links in human skeletal muscle, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab:
AMP-T2D consortium
Project:
AMP