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Schema
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Annotation type
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
in vitro differentiated cells
Biosample term
4
olfactory neurosphere cell line
Organ
2912
vasculature
2859
bodily fluid
2848
blood
2847
blood vessel
2658
vein
958
epithelium
652
kidney
478
connective tissue
465
brain
379
musculature of body
310
lung
287
intestine
276
pancreas
254
heart
244
limb
214
embryo
204
skin of body
173
large intestine
162
liver
146
extraembryonic component
118
stomach
109
eye
98
adipose tissue
89
bone element
87
mammary gland
83
small intestine
83
uterus
79
artery
78
prostate gland
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
43
spinal cord
33
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
thyroid gland
22
ovary
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Life stage
3
adult
Date released
3
September, 2022
1
June, 2020
Software used
2
r
1
chromhmm
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
3
EpiMap
1
ChIP-Atlas
RFA
4
AMP
software_used.software.name!
nospecificsoft_customcode
Showing 4 of 4 results
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Download
FileSet
DSR019UGB
released
Annotation file set
: Candidate regulatory elements for BSS01392 olfactory neurosphere cell line from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR153WUM
released
Annotation file set
: Target gene predictions for BSS01392 olfactory neurosphere cell line from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR200PFR
released
Annotation file set
: Chromatin states for BSS01392 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR132DAC
released
Annotation file set
: Accessible chromatin annotation for Others Olf neurosphere from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP