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Clear Filters
Annotation type
  • 4accessible chromatin
  • 3histone modifications
  • 2binding sites
Annotation Category
  • 9cis-regulatory elements
Annotation type Category
  • 5ChIP-seq
  • 2DNase-seq
  • 2snATAC-seq
Available data
  • 9bed bed3+
  • 2bigWig
File set status
  • 9released
Genome assembly (visualization)
  • 9hg19
  • 2GRCh38
Organism
  • 9Homo sapiens
Biosample type
  • 5primary cell
  • 4tissue
Biosample term
  • 4placenta
  • 3fibroblast of villous mesenchyme
  • 1placental hematopoietic stem cell
  • 1placental villus capillary endothelial cell
Organ
  • 270epithelium
  • 130connective tissue
  • 98brain
  • 73pancreas
  • 67eye
  • 64bodily fluid
  • 62blood
  • 58kidney
  • 57vasculature
  • 49liver
  • 43blood vessel
  • 40musculature of body
  • 40skin of body
  • 37heart
  • 35embryo
  • 34intestine
  • 28bone element
  • 24limb
  • 22lymph node
  • 21artery
  • 21lung
  • 21mammary gland
  • 20large intestine
  • 20prostate gland
  • 16extraembryonic component
  • 13penis
  • 10adipose tissue
  • 9placenta
  • 9stomach
  • 8gonad
  • 8skeleton
  • 8uterus
  • 7adrenal gland
  • 6bone marrow
  • 6lymphatic vessel
  • 5bronchus
  • 5testis
  • 5trachea
  • 4esophagus
  • 4thymus
  • 4ureter
  • 4vein
  • 3lymphoid tissue
  • 3nerve
  • 3small intestine
  • 3spinal cord
  • 3spleen
  • 2ovary
  • 2thyroid gland
  • 1breast
  • 1mouth
  • 1nose
  • 1pituitary gland
  • 1tongue
  • 1urinary bladder
Date released
  • 5February, 2021
  • 2June, 2020
  • 2November, 2021
Software used
  • 32r
  • 17chromhmm
  • 13encode-ccres
  • 9macs
  • 1abc
  • 1qTLtools
Lab
  • 7AMP-T2D consortium
  • 2Bing Ren, UCSD
Project
  • 7AMP
  • 2ENCODE
Collection Tags
  • 7ChIP-Atlas
  • 2AMP
  • 2T2DKP
RFA
  • 7AMP
  • 2ENCODE3

Showing 9 of 9 results

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  • FileSet

    DSR983RIG

    released

    Annotation file set: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR100TUS

    released

    Annotation file set: Accessible chromatin annotation of Fetal Placental Endothelial Cell from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR911IGW

    released

    Annotation file set: Histone modifications annotation for Placenta Villous_placenta from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR809ZLR

    released

    Annotation file set: Histone modifications annotation for Placenta Placenta from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR457YAR

    released

    Annotation file set: Histone modifications annotation for Placenta HVMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR307VXN

    released

    Annotation file set: Binding sites annotation for Placenta Placenta from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR108FJC

    released

    Annotation file set: Binding sites annotation for Placenta HVMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR953MXQ

    released

    Annotation file set: Accessible chromatin annotation for Placenta Placenta from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR263KFM

    released

    Annotation file set: Accessible chromatin annotation for Placenta HVMF from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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