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Assay category
20
DNA binding
2
DNA accessibility
2
DNA methylation
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Project
25
AMP
RFA
25
AMP
Experiment status
25
released
Genome assembly (visualization)
16
GRCh38
14
hg19
Organism
25
Homo sapiens
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Biosample type
25
tissue
Organ
946
pancreas
791
liver
684
connective tissue
491
adipose tissue
477
epithelium
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
97
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Life stage
24
adult
1
unknown
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Platform
9
Illumina HiSeq 4000
7
Illumina HiSeq 2500
6
Illumina HiSeq 2000
2
Illumina HiSeq X Ten
1
Illumina NextSeq 500
Run type
17
paired-ended
7
single-ended
Read length (nt)
13
76
8
100
2
151
1
36
Library made from
25
DNA
Date released
9
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Lab
25
AMP-T2D consortium
Replication type
24
unreplicated
1
anisogenic
type!!
Software
Showing 5 of 25 results
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Experiment
TSTSR054JQF
released
ChIP-seq
of spleen
Homo sapiens
spleen female adult (53 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR231DBI
released
ChIP-seq
of spleen
Homo sapiens
spleen male adult (54 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR768GNG
released
ChIP-seq
of spleen
Homo sapiens
spleen male adult (37 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR436ZZC
released
DNase-seq
of spleen
Homo sapiens
spleen male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR197AYP
released
WGBS
of spleen
Homo sapiens
spleen female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP