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Clear Filters
Annotation type
  • 2candidate regulatory elements
  • 2chromatin state
  • 1accessible chromatin
Annotation Category
  • 5cis-regulatory elements
Annotation type Category
  • 4ChIP-seq
  • 3DNase-seq
Available data
  • 3bed bed3+
  • 2bed bed9
File set status
  • 5released
Genome assembly (visualization)
  • 5hg19
  • 2GRCh38
Organism
  • 5Homo sapiens
Biosample type
  • 5tissue
Biosample term
  • 5tongue
Organ
  • 2830vasculature
  • 2807bodily fluid
  • 2801blood
  • 2786blood vessel
  • 2653vein
  • 591epithelium
  • 345connective tissue
  • 328brain
  • 300kidney
  • 233musculature of body
  • 176intestine
  • 171pancreas
  • 170lung
  • 164heart
  • 151embryo
  • 147limb
  • 134skin of body
  • 116liver
  • 106large intestine
  • 90eye
  • 80extraembryonic component
  • 73uterus
  • 71stomach
  • 70adipose tissue
  • 59artery
  • 59mammary gland
  • 57bone element
  • 51prostate gland
  • 46lymph node
  • 46small intestine
  • 44adrenal gland
  • 44penis
  • 41placenta
  • 38ureter
  • 32gonad
  • 29esophagus
  • 27thymus
  • 26spinal cord
  • 21spleen
  • 17lymphatic vessel
  • 17nerve
  • 17testis
  • 14ovary
  • 14thyroid gland
  • 13lymphoid tissue
  • 12bronchus
  • 12pituitary gland
  • 12skeleton
  • 11bone marrow
  • 10mouth
  • 8breast
  • 5tongue
  • 5trachea
  • 5urinary bladder
  • 5vagina
  • 2nose
Life stage
  • 4embryonic
Date released
  • 2February, 2021
  • 2September, 2022
  • 1June, 2020
Software used
  • r
  • 2chromhmm
  • 2encode-ccres
  • 1macs
Lab
  • 5AMP-T2D consortium
Project
  • 5AMP
Collection Tags
  • 2ENCODE
  • 2EpiMap
  • 1ChIP-Atlas
RFA
  • 5AMP
software_used.software.name!
  • r

Showing 5 of 5 results

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  • FileSet

    DSR744RHI

    released

    Annotation file set: Chromatin states for BSS01846 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR992FWK

    released

    Annotation file set: Chromatin states for BSS01845 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR421UUQ

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE tongue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR939WYG

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE tongue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR448VSD

    released

    Annotation file set: Accessible chromatin annotation for Others Tongue from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
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