Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
Clear Filters
Annotation type
  • 4target gene predictions
  • 2chromatin state
  • 1accessible chromatin
  • 1candidate regulatory elements
Annotation Category
  • 4Target gene links
  • 4cis-regulatory elements
Annotation type Category
  • 5DNase-seq
  • 3ChIP-seq
  • 1pCHi-C
Available data
  • 6bed bed3+
  • 2bed bed9
File set status
  • 8released
Genome assembly (visualization)
  • 5GRCh38
  • 5hg19
Organism
  • 8Homo sapiens
Biosample type
  • 6tissue
  • 2cell line
Biosample term
  • 5urinary bladder
  • 2urothelium cell line
  • 1bladder (urinary bladder)
Organ
  • 3318blood
  • 2819vasculature
  • 2801bodily fluid
  • 2799blood vessel
  • 2654vein
  • 764brain
  • 585epithelium
  • 404kidney
  • 395heart
  • 383connective tissue
  • 299lung
  • 245intestine
  • 239musculature of body
  • 226skin of body
  • 213pancreas
  • 193liver
  • 158large intestine
  • 151embryo
  • 147limb
  • 142eye
  • 113adipose tissue
  • 111muscle organ
  • 108extraembryonic component
  • 92stomach
  • 83uterus
  • 76mammary gland
  • 73adrenal gland
  • 72bone element
  • 71thymus
  • 68artery
  • 65placenta
  • 60__MARKER__
  • 60prostate gland
  • 59small intestine
  • 50spleen
  • 47ureter
  • 46gonad
  • 46lymph node
  • 44penis
  • 38thyroid gland
  • 32esophagus
  • 32spinal cord
  • 23ovary
  • 22testis
  • 17nerve
  • 16skeleton
  • 14lymphatic vessel
  • 13lymphoid tissue
  • 12bronchus
  • 12mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 5trachea
  • 2nose
  • 1embryonic structure
  • 1gallbladder
Life stage
  • 2adult
  • 1embryonic
Date released
  • 3July, 2026
  • 2September, 2022
  • 1February, 2021
  • 1June, 2020
  • 1March, 2020
Software used
  • r
  • 2chromhmm
  • 1encode-ccres
  • 1macs
  • 1nospecificsoft_customcode
Lab
  • 8AMP-T2D consortium
Project
  • 8AMP
Collection Tags
  • 3ENCODE-rE2G
  • 2EpiMap
  • 1ChIP-Atlas
  • 1DGA
  • 1ENCODE
RFA
  • 8AMP
software_used.software.name!
  • r

Showing 8 of 8 results

table-tab-iconmatrix-icon

  • FileSet

    DSR061622

    released

    Annotation file set: Target gene predictions for urothelium cell line (EFO:0005913) derived from ENCODE-rE2G (ENCSR121CCQ).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR917240

    released

    Annotation file set: Target gene predictions for urothelium cell line (EFO:0005913) derived from ENCODE-rE2G (ENCSR930ETB).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR470900

    released

    Annotation file set: Target gene predictions for urinary bladder (UBERON:0001255) derived from ENCODE-rE2G (ENCSR091VPY).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR730WZO

    released

    Annotation file set: Chromatin states for BSS01878 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR253KIF

    released

    Annotation file set: Chromatin states for BSS01876 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR288GIE

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE urinary bladder
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR286PTG

    released

    Annotation file set: Accessible chromatin annotation for Others Urinary Bladder from ChIP-atlas
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR634RKB

    released

    Annotation file set: A target gene prediction annotation in Human Bladder of GSE86189 pCHi-C
    Lab: AMP-T2D consortium
    Project: AMP
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego