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Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA binding
2
DNA accessibility
1
DNA methylation
Assay
3
ChIP-seq
2
DNase-seq
1
RRBS
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
4
GRCh38
Organism
6
Homo sapiens
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Biosample type
6
primary cell
Organ
946
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Life stage
6
unknown
Available data
5
bam
5
bigWig
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Platform
2
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
Run type
3
single-ended
Read length (nt)
3
36
Library made from
6
DNA
Date released
3
November, 2017
2
June, 2019
1
July, 2019
Lab
6
AMP-T2D consortium
Replication type
5
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
organ_slims!
blood vessel
skin of body
Showing 6 of 6 results
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Experiment
DSR438ASZ
released
RRBS
of choroid plexus epithelial cell
Homo sapiens
choroid plexus epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR926WTD
released
DNase-seq
of choroid plexus epithelial cell
Homo sapiens
choroid plexus epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR678DGR
released
Audit error
1
DNase-seq
of smooth muscle cell of the brain vasculature
Homo sapiens
smooth muscle cell of the brain vasculature female
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR545778
released
ChIP-seq
of choroid plexus epithelial cell
Homo sapiens
choroid plexus epithelial cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR411985
released
ChIP-seq
of choroid plexus epithelial cell
Homo sapiens
choroid plexus epithelial cell
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR504387
released
ChIP-seq
of choroid plexus epithelial cell
Homo sapiens
choroid plexus epithelial cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP