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Annotation type
3
caQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
1
coronary artery
1
fibroblast of the aortic adventitia
1
smooth muscle cell of the coronary artery
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
Date released
3
February, 2023
Software used
83
r
57
macs
37
chromhmm
26
encode-ccres
18
deseq2
15
deltasvm
9
qTLtools
4
abc
4
salmon
3
gtex_eqtl:V8
3
gtex_finemapping_eQTL:caveman
3
gtex_finemapping_eQTL:caviar
3
gtex_finemapping_eQTL:dapg
3
rasqual
2
hiccups
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
Project
3
AMP
Collection Tags
3
CMDGA
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702NJX
released
Annotation file set
: Chromatin accessibility QTLs in smooth muscle cells passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575ALX
released
Annotation file set
: Chromatin accessibility QTLs from bulk coronary artery of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP