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Schema
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Annotation type
5
chromatin state
1
binding sites
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
4
bed bed9
2
bed bed3+
2
bigBed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
4
GRCh38
Organism
6
Homo sapiens
Biosample type
6
primary cell
Biosample term
6
endothelial cell of umbilical vein
Organ
79
kidney
78
brain
75
lung
75
musculature of body
60
intestine
59
connective tissue
58
epithelium
51
heart
50
limb
46
bodily fluid
44
blood
39
skin of body
37
large intestine
37
vasculature
34
extraembryonic component
30
blood vessel
29
embryo
24
stomach
20
small intestine
18
liver
18
mammary gland
17
pancreas
17
placenta
16
bone element
14
adrenal gland
13
prostate gland
13
ureter
12
penis
11
eye
11
thymus
10
adipose tissue
10
lymph node
9
artery
9
gonad
9
spinal cord
7
esophagus
6
spleen
6
vein
5
lymphoid tissue
5
testis
5
uterus
4
mouth
4
nerve
4
ovary
4
thyroid gland
3
skeleton
2
bone marrow
2
breast
2
bronchus
2
lymphatic vessel
2
tongue
2
urinary bladder
2
vagina
1
nose
Life stage
2
newborn
Date released
2
January, 2020
2
September, 2022
1
August, 2017
1
October, 2022
Software used
6
chromhmm
5
r
4
encode-ccres
4
macs
1
abc
1
deltasvm
1
hiccups
Lab
5
AMP-T2D consortium
1
Stephen Parker, UMich
Project
6
AMP
Collection Tags
2
EpiMap
1
ENCODE
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR398JDG
released
Annotation file set
: Binding sites annotation for endothelial cell of umbilical vein (HUVEC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR660JUZ
released
Annotation file set
: Chromatin states for BSS00298 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR550HDB
released
Annotation file set
: Chromatin states for BSS00296 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR000759
released
Annotation file set
: ChromHMM 13-state model for endothelial cell of umbilical vein
Lab:
Stephen Parker, UMich
Project:
AMP