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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
chromatin state
2
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed9
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
13
common myeloid progenitor, CD34-positive
10
hematopoietic multipotent progenitor cell
9
CD4-positive, alpha-beta memory T cell
8
B cell
7
CD8-positive, alpha-beta memory T cell
6
adipose tissue
6
adrenal gland
6
mononuclear cell
6
stomach
5
liver
5
sigmoid colon
5
spleen
4
CD14-positive monocyte
4
T cell
4
body of pancreas
4
endocrine pancreas
4
foreskin keratinocyte
4
gastrocnemius medialis
4
psoas muscle
4
thyroid gland
4
transverse colon
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
caudate nucleus
3
fibroblast of dermis
3
fibroblast of lung
3
heart left ventricle
3
layer of hippocampus
3
mammary gland epithelial cell
3
naive T cell
3
natural killer cell
3
ovary
3
regulatory T cell
3
skeletal muscle tissue
3
small intestine
3
tibial nerve
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
adipocyte
2
angular gyrus
2
aorta
2
ascending aorta
2
breast epithelium
2
bronchial epithelial cell
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
coronary artery
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endothelial cell of umbilical vein
2
epithelial cell of prostate
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
fibroblast of breast
2
fibroblast of cardiac tissue
2
frontal cortex
2
heart
2
heart right ventricle
2
keratinocyte
2
kidney
2
kidney tubule cell
2
lower leg skin
2
lung
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
skeletal muscle myoblast
2
stomach smooth muscle
2
substantia nigra
2
temporal lobe
2
testis
2
thoracic aorta
2
tibial artery
2
vagina
1
Ammon's horn
1
CD1c-positive myeloid dendritic cell
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bipolar neuron
1
brain microvascular endothelial cell
1
cerebellar cortex
1
chorion membrane
1
choroid plexus epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
foreskin melanocyte
1
gastroesophageal sphincter
1
germinal center
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
hepatocyte
1
inferior parietal cortex
1
iris pigment epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary stem cell
1
medulla oblongata
1
mesenchymal stem cell
1
midbrain
1
middle frontal gyrus
1
mucosa of stomach
1
non-pigmented ciliary epithelial cell
1
occipital lobe
1
olfactory neurosphere cell line
1
osteoblast
1
pericyte cell
1
pons
1
pulmonary artery endothelial cell
1
putamen
1
rectum smooth muscle tissue
1
regular cardiac myocyte
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
right cardiac atrium
1
right lobe of liver
1
skeletal muscle cell
1
skeletal muscle satellite cell
1
smooth muscle cell of the brain vasculature
1
stromal cell of bone marrow
1
superior temporal gyrus
1
thymus
1
urinary bladder
1
uterus
Organ
2
heart
Life stage
embryonic
1
adult
1
child
Date released
2
September, 2022
Software used
2
chromhmm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
cell line
relevant_life_stage!
embryonic
Showing 2 of 2 results
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Download
FileSet
DSR821WIY
released
Annotation file set
: Chromatin states for BSS00514 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR184ZIQ
released
Annotation file set
: Chromatin states for BSS00516 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP