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Annotation type
6
caQTL
Annotation Category
6
Genetic variant effects
Annotation type Category
5
snATAC-seq
1
ATAC-seq
Available data
6
bed bed3+
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Biosample term
1
endothelial cell
1
liver
1
mesenchymal stem cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
1
epithelium
1
liver
Date released
5
October, 2022
1
May, 2022
Software used
2546
macs
2386
r
1035
chromhmm
838
encode-ccres
250
abc
148
qTLtools
136
deltasvm
133
deseq2
32
cicero
27
chicago
27
nospecificsoft_customcode
25
seurat
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
18
samtools
15
limix
14
hiccups
14
matrix-eQTL
12
deeptools
12
umitools
11
rasqual
9
salmon
8
fastqtl
6
eigenmt
5
peer
5
unknown
3
mach2qtl
3
minfi
3
sqtlseeker
2
combined S2G strategy
2
emmax
2
mpraflow
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
bimbam
cisgenome
1
e-range
1
epacts
1
fast-lmm
1
haploview
1
pepatac
1
probabel
1
snap
1
spp
Lab
5
Stephen Parker, UMich
1
Karen Mohlke, UNC
Project
6
AMP
Collection Tags
6
DGA
5
T2DKP
1
AMP
RFA
5
AMP2
1
AMP
software_used.software.name!
cisgenome
Showing 6 of 6 results
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Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR273WHL
released
Annotation file set
: Chromatin site QTLs of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR085VQO
released
Annotation file set
: Chromatin site QTLs of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR375CST
released
Annotation file set
: Chromatin site QTLs of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR259FVK
released
Annotation file set
: Chromatin site QTLs of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP