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Annotation type
12
gene expression
Annotation Category
12
Gene expression levels
Annotation type Category
12
snRNA-seq
File set status
12
released
Genome assembly (visualization)
12
hg19
Organism
12
Homo sapiens
Biosample type
12
primary cell
Biosample term
2
skeletal muscle fiber
1
adipocyte
1
endothelial cell
1
glial cell
1
leukocyte
1
mesenchymal stem cell
1
neural cell
1
skeletal muscle satellite cell
1
smooth muscle cell
1
type I muscle cell
1
type II muscle cell
Organ
5
musculature of body
2
connective tissue
1
epithelium
Date released
12
February, 2024
Software used
2558
macs
2386
r
1035
chromhmm
838
encode-ccres
250
abc
139
qTLtools
136
deltasvm
117
deseq2
36
cicero
27
chicago
27
nospecificsoft_customcode
25
seurat
24
gtex_eqtl:V8
24
gtex_finemapping_eQTL:caveman
24
gtex_finemapping_eQTL:caviar
24
gtex_finemapping_eQTL:dapg
18
samtools
15
limix
14
hiccups
14
matrix-eQTL
12
deeptools
12
umitools
11
rasqual
9
salmon
8
fastqtl
6
eigenmt
5
peer
5
unknown
3
mach2qtl
3
minfi
3
sqtlseeker
2
combined S2G strategy
2
emmax
2
mpraflow
1
altius-index
1
bedops
1
betacells_cytokines_t1d
1
bimbam
1
cisgenome
1
e-range
1
epacts
1
fast-lmm
1
haploview
1
pepatac
1
probabel
1
snap
1
spp
Lab
12
Stephen Parker, UMich
Project
12
AMP
Collection Tags
12
T2DKP
12
DGA
RFA
12
AMP2
type!!!!
Experiment
Showing 8 of 12 results
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FileSet
DSR873DHZ
released
Annotation file set
: Cell type gene expression mean TPM and bw of smooth muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR811PAV
released
Annotation file set
: Cell type gene expression mean TPM and bw of neural cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR985XYU
released
Annotation file set
: Cell type gene expression mean TPM and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR543XVO
released
Annotation file set
: Cell type gene expression mean TPM and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR031MTY
released
Annotation file set
: Cell type gene expression mean TPM and bw of immune cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR429BRE
released
Annotation file set
: Cell type gene expression mean TPM and bw of glial Schwann from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR251UJD
released
Annotation file set
: Cell type gene expression mean TPM and bw of endothelial cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP