Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
histone modifications
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
primary cell
Biosample term
25
kidney
22
stomach
21
heart
20
breast cancer cell
17
brain
17
lung
17
muscle of arm
15
epithelial cell of proximal tubule
15
muscle of back
15
placenta
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
large intestine
14
small intestine
13
glomerular endothelial cell
13
left lung
13
muscle of leg
12
neuroblastoma cell
11
cardiomyocytes
11
gastric cancer cell
11
hematopoietic multipotent progenitor cell
10
diffuse intrinsic pontine glioma
10
renal cortex interstitium
10
right lung
10
thymus
9
Rhabdomyosarcoma
9
cardiac muscle cell
9
foreskin keratinocyte
9
islet of Langerhans
9
liposarcoma
9
liver
9
mammary epithelial cell
9
renal pelvis
8
CD4-positive, alpha-beta T cell
8
MCF-7
8
T-cell acute lymphoblastic leukemia
8
esophageal adenocarcinoma
8
foreskin fibroblast
8
induced pluripotent stem cell
8
keratinocyte
8
left kidney
8
neuronal stem cell
8
right kidney
8
spleen
7
B cell
7
B-lymphoblastoid cell line
7
CD8-positive, alpha-beta T cell
7
endothelial cell
7
fibroblast cell line
7
hESC cell
7
heart left ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
spinal cord
6
Chondroid Chordoma
6
H9
6
acute myeloid leukemia
6
bronchial epithelial cell
6
hepatocyte
6
kidney interstitial cell
6
neuroblastoma cell line
5
A549
5
CD4-positive, alpha-beta memory T cell
5
Ewing sarcoma
5
adipocyte
5
adipose tissue
5
embryonic stem cell
5
endothelial cell of umbilical vein
5
esophageal squamous cell carcinoma
5
foreskin melanocyte
5
glioblastoma multiforme cancer stem cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
natural killer cell
5
neural progenitor cell
5
osteoblast
5
osteosarcoma
5
prostate cancer cell line
5
testis
4
22Rv1
4
CD14-positive monocyte
4
HEK293
4
HS-SY-2 cell
4
HepG2
4
Jurkat
4
LNCAP
4
Mantle cell lymphoma
4
Peyer's patch
4
RS4-11 cell
4
Rh-4 cell
4
T-cell
4
Th1 cell
4
Tumor-derived cell line
4
WI38
4
body of pancreas
4
bone tissue
4
chorionic villus
4
colon adenocarcinoma
4
dermal fibroblast
4
diffuse large B-cell lymphoma
4
erythroid progenitor cell
4
esophagus squamous epithelium
4
gastroesophageal sphincter
4
glioblastoma cell
4
glioma cell
4
glomerular visceral epithelial cell
4
immortal neural cell line cell
4
kidney cortex collecting duct principal cell
4
nephron progenitor
4
pancreas
4
right renal pelvis
4
sigmoid colon
4
squamous cell lung carcinoma
4
synovial sarcoma cell
4
tracheal epithelial cell
4
triple-negative breast cancer
4
upper lobe of left lung
3
B-lymphocyte
3
CD1c-positive myeloid dendritic cell
3
CMK
3
COLO-320 cell
3
COLO205
3
GM06990
3
GM12864
3
GM12865
3
GM12873
3
GM12875
3
GM12878
3
GM23248
3
HAP-1
3
HL-60
3
HT-29
3
IMR-90
3
Ishikawa
3
K562
3
LHCN-M2
3
MCF 10A
3
MG63
3
MM.1S
3
OCI-LY1
3
OCI-LY7
3
PC-3
3
PC-9
3
RKO
3
RPMI8226
3
RWPE1
3
S-shaped body
3
SK-N-DZ
3
SK-N-MC
3
SW480
3
T-helper 1 cell
3
WERI-Rb-1
3
adult endothelial progenitor cell
3
ascending aorta
3
breast epithelium
3
cardiac fibroblast
3
cardiac precursors (cardiac muscle cell)
3
caudate nucleus
3
choroid plexus epithelial cell
3
chronic lymphocytic leukemia cell
3
colonic mucosa
3
dermis blood vessel endothelial cell
3
dermis microvascular lymphatic vessel endothelial cell
3
endocrine pancreas
3
endodermal cell
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
fibroblast
3
fibroblast of lung
3
fibroblast of mammary gland
3
gastrocnemius medialis
3
hematopoietic cell
3
hepatic stellate cell
3
kidney cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
layer of hippocampus
3
left renal pelvis
3
leukemic stem cell
3
lower leg skin
3
lymphoblastoid cell line
3
melanoma
3
subcutaneous adipose tissue
3
trophoblast cell
2
143B
2
501A
2
697 cell
2
769-P cell
2
786-O cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A-673 cell
2
AG04449 cell
2
AG04450 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803
Organ
4
connective tissue
Life stage
1
adult
1
embryonic
Date released
6
September, 2022
4
February, 2021
3
February, 2024
1
June, 2020
1
March, 2020
1
May, 2021
1
May, 2022
1
October, 2019
1
October, 2022
Software used
2
encode-ccres
2
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
Fine-mapped variants
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR718ELE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR627LDJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337GCY
released
Annotation file set
: Histone modifications annotation for Others Mesenchymal_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR959CJP
released
Annotation file set
: Binding sites annotation for Others Mesenchymal_stem_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP