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Citing CMDGA
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Annotation type
2
gene expression
1
binding sites
Annotation Category
2
Gene expression levels
1
cis-regulatory elements
Annotation type Category
2
RNA-seq
1
ChIP-seq
Available data
2
tsv
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
4
cardiomyocytes (cardiac muscle cell)
4
hepatocyte
3
islet of Langerhans
3
psoas muscle
2
aorta
2
cardiac precursors (cardiac muscle cell)
2
heart left ventricle
2
heart right ventricle
2
liver
2
pancreas
1
Ammon's horn
1
B-lymphoblastoid cell line
1
EndoC_BH1
1
HepG2
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
adipose tissue
1
adrenal gland
1
bladder (urinary bladder)
1
dorsolateral prefrontal cortex
1
embryonic stem cell
1
endothelial cell of umbilical vein
1
esophagus
1
fibroblast cell line
1
gastric (mucosa of stomach)
1
heart
1
lung
1
lymphocyte of B lineage (iPSC)
1
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell
1
ovary
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
thymus
1
trophoblast
1
white adipose cell
Disease term
1
type 2 diabetes mellitus
Organ
3
pancreas
Life stage
2
adult
Date released
9
February, 2021
8
August, 2021
4
March, 2023
3
January, 2022
3
March, 2020
3
May, 2020
3
May, 2021
2
August, 2017
1
April, 2019
1
February, 2024
1
January, 2018
1
January, 2020
1
June, 2020
1
November, 2019
1
November, 2021
1
September, 2022
Software used
2
r
1
spp
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
AMP
RFA
3
AMP
annotation_type!
Fine-mapped variants
Showing 3 of 3 results
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Download
FileSet
DSR388BHU
released
Annotation file set
: Gene expression levels of pancreatic islets (islet of Langerhans) for normal individuals from RNA-seq (SRP117935)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR839IGA
released
Annotation file set
: Gene expression levels of pancreatic islets (islet of Langerhans) for T2D individuals from RNA-seq (SRP117935)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR883333
released
Annotation file set
: Islet TF binding sites (PDX, MAFB, NKX2.2, NKX6.1, FOXA2)
Lab:
Kyle Gaulton, UCSD
Project:
AMP