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Citing CMDGA
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Annotation type
5
accessible chromatin
3
differential activity
3
gene expression
3
target gene predictions
1
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
snATAC-seq
1
ATAC-seq
Available data
5
bed bed3+
5
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
4
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
8
EndoC_BH1
7
islet of Langerhans
7
pancreatic beta cell
6
pancreatic alpha cell
5
pancreas
5
pancreatic acinar cell
5
pancreatic ductal cell
4
pancreatic delta cell
2
pancreatic stellate cell
1
pancreatic polypeptide-secreting cell
Organ
5
epithelium
5
pancreas
Date released
3
November, 2021
February, 2024
1
January, 2021
1
October, 2019
Software used
5
macs
Lab
3
Bing Ren, UCSD
1
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
3
ENCODE
1
AMP
1
T1D
RFA
3
ENCODE3
1
AMP
1
T1D
annotation_type!
Fine-mapped variants
month_released!
February, 2024
Showing 5 of 5 results
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Download
FileSet
DSR929UEX
released
Annotation file set
: Accessible chromatin annotation of Fetal Pancreatic Acinar Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR695XNH
released
Annotation file set
: Accessible chromatin annotation of Fetal Pancreatic Acinar Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR157ZRL
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Acinar Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR467IUK
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of acinar
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR639GZY
released
Annotation file set
: Pancreatic acinar cell accessible chromatin annotation of overlapping ATAC-seq sites from 4 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP