Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
accessible chromatin
2
variant allelic effects
Annotation Category
2
Genetic variant effects
Annotation type Category
36
ChIP-seq
22
DNase-seq
16
HiC
2
RNA-seq
2
snATAC-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
6
fibroblast
5
endothelial cell
5
macrophage
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
enterocyte
3
myofibroblast cell
3
smooth muscle cell
2
Schwann cell
2
T cell
2
basal cell
2
epithelial cell of esophagus
2
goblet cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
skeletal muscle fiber
2
vascular associated smooth muscle cell
1
CD8-positive, alpha-beta T cell
1
Satellite Cells, Skeletal Muscle
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
bronchial goblet cell
1
cardiac muscle cell
1
cell
1
conventional dendritic cell
1
cortical cell of adrenal gland
1
fibroblast of the aortic adventitia
1
granulosa cell
1
hepatocyte
1
keratinocyte
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
megakaryocyte
1
memory B cell
1
mesenchymal stem cell
1
mesothelial cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
pancreatic endocrine cell
1
pancreatic stellate cell
1
parietal cell
1
peptic cell
1
plasmacytoid dendritic cell
1
regulatory T cell
1
smooth muscle cell of the coronary artery
1
stellate neuron
1
thyroid follicular cell
1
type I muscle cell
1
type II muscle cell
1
type II pneumocyte
Date released
2
February, 2024
Software used
2
deltasvm
Lab
2
Bing Ren, UCSD
Project
2
AMP
RFA
2
AMP
annotation_type!
accessible chromatin
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR330XKZ
released
Annotation file set
: Variant allelic effects annotation of T lymphocytes from snATAC (sub-type2) from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR891UQE
released
Annotation file set
: Variant allelic effects annotation of T lymphocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP