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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
113
monocyte
85
heart
83
stomach
71
brain
71
kidney
68
lung
66
muscle of arm
64
HeLa-S3
62
small intestine
61
A549
61
adrenal gland
59
placenta
56
muscle of leg
55
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
53
H1-hESC
52
left lung
47
thymus
46
CD8-positive, alpha-beta T cell
45
liver
44
right lung
42
hematopoietic multipotent progenitor cell
41
neural progenitor cell
41
right kidney
40
K562
39
renal cortex interstitium
38
islet of Langerhans
38
renal pelvis
36
B cell
36
left kidney
33
spinal cord
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
heart left ventricle
29
adipose tissue
29
hepatocyte
25
MCF-7
25
endothelial cell
24
body of pancreas
23
regulatory T cell
22
CD8-positive, alpha-beta memory T cell
22
epithelial cell of proximal tubule
22
sigmoid colon
22
tibial nerve
22
trophoblast cell
21
foreskin keratinocyte
20
T-helper 1 cell
20
breast cancer cell
20
caudate nucleus
20
mononuclear cell
19
T-helper 17 cell
19
adipocyte
19
glomerular endothelial cell
19
keratinocyte
19
macrophage
19
natural killer cell
19
ovary
19
psoas muscle
18
HFFc6
18
foreskin fibroblast
18
subcutaneous adipose tissue
18
substantia nigra
17
coronary artery
17
endothelial cell of umbilical vein
17
heart right ventricle
17
muscle of trunk
17
pancreatic ductal cell
17
retina
17
thyroid gland
17
transverse colon
16
chorionic villus
16
fibroblast of lung
16
gastrocnemius medialis
16
induced pluripotent stem cell
16
layer of hippocampus
16
mesenchymal stem cell
16
omental fat pad
16
pancreas
16
right atrium auricular region
16
skeletal muscle tissue
16
testis
15
EndoC_BH1
15
GM12878
15
T cell
15
cerebellum
15
fibroblast
15
neutrophil
15
smooth muscle cell
15
tibial artery
15
upper lobe of left lung
14
CD4-positive, alpha-beta T cell
14
H9
14
HepG2
14
T-helper 2 cell
14
ascending aorta
14
cardiac muscle cell
14
endocrine pancreas
14
mammary gland epithelial cell
14
skeletal muscle myoblast
13
aorta
13
fibroblast of cardiac tissue
13
frontal cortex
13
neurosphere
13
prostate gland
13
temporal lobe
12
Peyer's patch
12
bronchial epithelial cell
12
fibroblast of dermis
12
neuroblastoma cell
12
putamen
11
lymphoblastoid cell line
11
mammary epithelial cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
osteoblast
10
22Rv1
10
Ammon's horn
10
embryonic stem cell
10
epithelial cell of prostate
10
gastric cancer cell
10
left cardiac atrium
10
left renal cortex interstitium
10
lymphocyte
10
pancreatic acinar cell
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
9
Rhabdomyosarcoma
9
SK-N-SH
9
breast epithelium
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
esophagus squamous epithelium
left renal pelvis
9
liposarcoma
9
neuronal stem cell
9
pancreatic beta cell
9
pancreatic delta cell
9
parathyroid adenoma
9
pericyte cell
9
right renal pelvis
9
thoracic aorta
9
trophoblast
9
vagina
8
B-lymphoblastoid cell line
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
endothelial cell of hepatic sinusoid
8
esophagus muscularis mucosa
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
lower leg skin
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
skeletal muscle satellite cell
8
tongue
7
GM12865
7
HEK293
7
IMR-90
7
NAMALWA cell
7
SK-N-DZ
7
SK-N-MC
7
T47D
7
amygdala
7
angular gyrus
7
astrocyte
7
cardiomyocytes (cardiac muscle cell)
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
foreskin melanocyte
7
glomerular visceral epithelial cell
7
hepatic stellate cell
7
kidney tubule cell
7
limb
7
mature neutrophil
7
mesendoderm
7
pancreatic alpha cell
7
right lobe of liver
7
stomach smooth muscle
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
Brodmann (1909) area 46
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM06990
6
GM12864
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
annotation_type!
accessible chromatin
organ_slims!
spleen
biosample_term_name!
left renal pelvis
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP