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Citing CMDGA
Clear Filters
Annotation type
6
target gene predictions
5
candidate regulatory elements
4
chromatin state
3
accessible chromatin
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
5
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
tissue
1
cell line
Biosample term
29
small intestine
27
large intestine
10
sigmoid colon
8
transverse colon
7
Peyer's patch
4
colonic mucosa
4
duodenal mucosa
4
mucosa of rectum
4
muscle layer of colon
4
muscle layer of duodenum
2
HCT116
2
HT-29
2
SW480
1
Caco-2
1
LoVo
1
RKO
1
colon epithelial cell
1
rectal smooth muscle tissue
1
rectum smooth muscle tissue
Organ
5
intestine
4
small intestine
1
epithelium
1
large intestine
Life stage
4
adult
1
unknown
Date released
3
September, 2022
2
February, 2021
Software used
3
r
2
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
binding sites
Showing 5 of 5 results
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Download
FileSet
DSR599ZEA
released
Annotation file set
: Candidate regulatory elements for BSS00271 duodenal mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR126IFF
released
Annotation file set
: Candidate regulatory elements for BSS00270 duodenal mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR635VAQ
released
Annotation file set
: Candidate regulatory elements for BSS00223 colon epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR725LDE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE duodenal mucosa
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR037SVA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE duodenal mucosa
Lab:
AMP-T2D consortium
Project:
AMP