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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
binding sites
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
12
prostate gland
11
epithelial cell of prostate
9
22Rv1
7
LNCaP clone FGC
6
PC-3
6
RWPE1
5
LNCAP
4
C4-2B
4
RWPE2
3
VCaP cell
1
VCaP
1
luminal epithelial cell of prostatic duct
1
prostate
Organ
5
prostate gland
Life stage
2
adult
Date released
3
February, 2021
1
June, 2020
1
May, 2021
Software used
2
encode-ccres
2
macs
1
abc
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
annotation_type!
binding sites
Showing 5 of 5 results
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Download
FileSet
DSR718TWX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LNCAP
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR543HLI
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE LNCAP
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR835IJD
released
Annotation file set
: Histone modifications annotation for Prostate LNCAP from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR563FIF
released
Annotation file set
: enhancer-gene predicton of LNCAP from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR475PYM
released
Annotation file set
: Accessible chromatin annotation for Prostate LNCAP from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP