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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
7
target gene predictions
1
accessible chromatin
Annotation Category
7
Target gene links
1
cis-regulatory elements
Annotation type Category
16
ChIP-seq
16
HiC
8
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
8
cell line
Biosample term
25
heart
24
stomach
20
A549
19
CD14-positive monocyte
19
brain
18
kidney
18
muscle of arm
17
adrenal gland
17
small intestine
16
lung
16
muscle of leg
16
placenta
15
large intestine
14
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of back
13
thymus
12
renal pelvis
12
right kidney
12
right lung
11
B cell
11
hematopoietic multipotent progenitor cell
11
renal cortex interstitium
10
pituitary stalk
10
spinal cord
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
liver
8
K562
8
heart left ventricle
8
pancreas
8
spleen
8
trophoblast cell
7
CD8-positive, alpha-beta memory T cell
7
MCF-7
7
adipocyte
7
adipose tissue
7
sigmoid colon
6
body of pancreas
6
caudate nucleus
6
dendritic cell
6
endothelial cell of umbilical vein
6
gastrocnemius medialis
6
hepatocyte
6
mononuclear cell
6
ovary
6
psoas muscle
6
retina
6
skeletal muscle myoblast
6
thyroid gland
6
tibial nerve
6
transverse colon
5
cardiac fibroblast
5
T cell
5
coronary artery
5
fibroblast of cardiac tissue
5
foreskin keratinocyte
5
frontal cortex
5
heart right ventricle
5
muscle of trunk
5
natural killer cell
5
osteoblast
5
regulatory T cell
5
right atrium auricular region
5
tibial artery
4
HeLa-S3
4
Peyer's patch
4
T-helper 1 cell
4
ascending aorta
4
breast epithelium
4
cardiac muscle cell
4
chorion membrane
4
chorionic villus
4
choroid plexus epithelial cell
4
endocrine pancreas
4
epithelial cell of prostate
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin fibroblast
4
globus pallidus
4
glomerular endothelial cell
4
glomerular visceral epithelial cell
4
hepatic stellate cell
4
kidney tubule cell
4
left renal cortex interstitium
4
left renal pelvis
4
mammary gland epithelial cell
4
medulla oblongata
4
mesenchymal stem cell
4
midbrain
4
neural progenitor cell
4
occipital lobe
4
pons
4
putamen
4
renal cortical epithelial cell
4
right renal cortex interstitium
4
right renal pelvis
4
skin fibroblast
4
superior temporal gyrus
4
testis
4
upper lobe of left lung
3
Ammon's horn
3
CD4-positive helper T cell
3
CD8-positive, alpha-beta T cell
3
GM12878
3
H1-hESC
3
H7-hESC
3
HAP-1
3
HT-29
3
HepG2
3
IMR-90
3
Jurkat
3
KARPAS-422 cell
3
LoVo cell
3
MM.1S
3
NAMALWA cell
3
OCI-LY7
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
T-helper 17 cell
3
T-helper 2 cell
3
U937
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
bipolar neuron
3
brain pericyte
3
bronchial epithelial cell
3
cerebellum
3
endometrium adenocarcinoma
3
epithelial cell of proximal tubule
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
immortal human breast epithelial cell line cell
3
keratinocyte
3
kidney capillary endothelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left cardiac atrium
3
limb
3
mesendoderm
3
middle frontal gyrus
3
monocyte
3
naive T cell
3
neurosphere
3
omental fat pad
3
prostate gland
3
retinal pigment epithelial cell
3
skeletal muscle cell
3
skeletal muscle tissue
3
smooth muscle cell of the brain vasculature
3
tongue
3
trophoblast
3
urinary bladder
3
uterus
2
hindlimb muscle
2
muscle of leg
2
22Rv1
2
A172
2
A673
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
BJAB cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CMK
2
Caco-2 cell
2
Caki2
2
Daoy
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM18507
2
GM19240
2
GM23248
2
H4
2
H9
2
HCT-116 cell
2
HEK293
2
HL-60
2
HUES6
2
HuH-7
2
KBM-7
2
L1-S8
2
L1-S8R
2
LHCN-M2
Disease term
6
Philadelphia-positive myelogenous leukemia
Organ
8
blood
8
bodily fluid
Life stage
6
adult
Date released
6
September, 2022
1
June, 2020
1
May, 2021
Software used
6
r
1
abc
1
macs
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
annotation_type!
candidate regulatory elements
Showing 8 of 8 results
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Download
FileSet
DSR923QRM
released
Annotation file set
: Target gene predictions for BSS01059 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR149JSX
released
Annotation file set
: Target gene predictions for BSS01057 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR726HNK
released
Annotation file set
: Target gene predictions for BSS01056 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR715SRR
released
Annotation file set
: Target gene predictions for BSS01039 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR264EWL
released
Annotation file set
: Target gene predictions for BSS01038 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR201QOZ
released
Annotation file set
: Target gene predictions for BSS00762 K562 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR412LFE
released
Annotation file set
: enhancer-gene predicton of K562-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP