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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
primary cell
1
in vitro differentiated cells
Biosample term
53
heart
52
kidney
46
stomach
44
brain
44
islet of Langerhans
41
neural progenitor cell
36
liver
35
lung
34
adrenal gland
34
muscle of arm
34
placenta
34
retina
34
small intestine
31
muscle of leg
29
large intestine
28
thymus
26
left lung
26
muscle of back
25
adipose tissue
24
hematopoietic multipotent progenitor cell
23
heart left ventricle
23
right lung
22
right kidney
21
renal pelvis
20
pigmented layer of retina
20
renal cortex interstitium
19
adipocyte
19
spleen
19
subcutaneous adipose tissue
19
tibial nerve
18
coronary artery
18
left kidney
17
caudate nucleus
17
pancreas
17
spinal cord
16
body of pancreas
16
right atrium auricular region
16
tibial artery
14
embryonic stem cell
14
frontal cortex
13
cerebellum
13
heart right ventricle
13
omental fat pad
13
ovary
13
psoas muscle
13
putamen
13
sigmoid colon
13
substantia nigra
12
ascending aorta
11
cardiomyocytes
11
testis
11
thyroid gland
11
transverse colon
10
Ammon's horn
10
gastrocnemius medialis
10
layer of hippocampus
10
left cardiac atrium
10
prostate gland
10
skeletal muscle tissue
9
aorta
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
mesenchymal stem cell
9
muscle of trunk
9
progenitor cell of endocrine pancreas
9
temporal lobe
9
upper lobe of left lung
8
T-cell acute lymphoblastic leukemia
8
cardiomyocytes (cardiac muscle cell)
8
chorionic villus
8
endocrine pancreas
8
neuroblastoma cell line
7
Peyer's patch
7
amygdala
7
chorion membrane
7
hypothalamus
7
mesendoderm
7
midbrain
7
nucleus accumbens
7
occipital lobe
7
right lobe of liver
7
thoracic aorta
7
trophoblast
6
angular gyrus
6
anterior cingulate cortex
6
breast epithelium
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
colonic mucosa
6
dendritic cell
6
esophagus
6
esophagus muscularis mucosa
6
globus pallidus
6
left renal cortex interstitium
6
left renal pelvis
6
neuronal stem cell
6
retinal pigment epithelial cell
6
right cardiac atrium
6
right renal cortex interstitium
6
right renal pelvis
6
superior temporal gyrus
6
uterus
6
vagina
5
C1 segment of cervical spinal cord
5
SGBS preadipocytes
5
cartilage tissue
5
chondrocyte
5
cingulate gyrus
5
duodenal mucosa
5
esophagus squamous epithelium
5
eye
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
limb
5
medulla oblongata
5
mucosa of rectum
5
pancreatic ductal cell
5
pons
5
skin of body
5
stomach smooth muscle
5
tongue
5
urinary bladder
4
B cell
4
Brodmann (1909) area 46
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
adipose-derived stem cell
4
bipolar neuron
4
bone tissue
4
colon adenocarcinoma
4
cortex of kidney
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endodermal cell
4
lower leg skin
4
middle frontal gyrus
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
parathyroid adenoma
4
rhabdomyosarcoma cell
4
umbilical cord
4
visceral abdominal adipose tissue
3
cardiac muscle cell
3
cerebellar cortex
3
dorsolateral prefrontal cortex
3
embryonic facial prominence
3
esophageal adenocarcinoma
3
foreskin keratinocyte
3
foreskin melanocyte
3
germinal matrix
3
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
3
inferior parietal cortex
3
mammary gland epithelial cell
3
mesodermal cell
3
olfactory neurosphere cell line
3
pancreatic ductal adenocarcinoma
3
prefrontal cortex
3
rectum smooth muscle tissue
3
smooth muscle cell
3
trophoblast cell
2
hindlimb muscle
2
muscle of leg
2
BICR 31
2
CD4-positive helper T cell
2
CD8-Positive T-Lymphocytes
2
EAhy 926 cell
2
T-lymphoma cell line
2
Th1 cell
2
amnion
2
arm bone
2
atypical teratoid rhabdoid tumor
2
blood
2
breast carcinoma
2
cardiac mesoderm primordium
2
chronic myelomonocytic leukemia
2
colorectal adenocarcinoma
2
dermis microvascular lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
diffuse intrinsic pontine glioma
2
diffuse large B-cell lymphoma
2
ectodermal cell
2
endometrial stromal cell
2
endometrial stromal tumor
2
endometriosis
2
endometrium cancer
2
endothelial cell
2
epidermal stem cell
2
erythroid progenitor cell
2
excitatory neuron
2
fallopian tube
2
femur
2
fibroblast
2
first pancreatic bud
2
gastroesophageal sphincter
2
germinal center
2
hepatocyte
2
hippocampal neuron
2
islet precursor cell
2
kidney epithelium
2
leg bone
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
candidate regulatory elements
biosample_type!
cell line
primary cell
Showing 1 of 1 results
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Download
FileSet
DSR589PDF
released
Annotation file set
: Accessible chromatin annotation for Blood CD8+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP