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Schema
Citing CMDGA
Clear Filters
Annotation type
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
chromatin state
Annotation Category
2
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
20
hematopoietic multipotent progenitor cell
12
adipocyte
9
neural progenitor cell
6
dendritic cell
6
embryonic stem cell
5
mesenchymal stem cell
4
endodermal cell
4
muscle cell
3
bipolar neuron
3
cardiomyocytes (cardiac muscle cell)
3
mesendoderm
3
trophoblast cell
2
cardiac mesoderm primordium
2
cardiac muscle cell
2
ectodermal cell
2
hepatocyte
2
islet precursor cell
2
lymphocyte of B lineage (iPSC)
2
mesodermal cell
2
neural cell
2
neuron
2
olfactory neurosphere cell line
2
smooth muscle cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
cardiac precursors (cardiac muscle cell)
1
myotube
1
neuronal stem cell
1
skeletal muscle myoblast
1
white adipose cell
Life stage
2
adult
Date released
2
September, 2022
1
May, 2021
Software used
1
abc
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
annotation_type!
candidate regulatory elements
Showing 3 of 3 results
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Download
FileSet
DSR184UDS
released
Annotation file set
: Target gene predictions for BSS00112 bipolar neuron from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR610PTO
released
Annotation file set
: Chromatin states for BSS00112 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR109CTD
released
Annotation file set
: enhancer-gene predicton of bipolar_neuron_from_iPSC-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP