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Citing CMDGA
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Annotation type
2
accessible chromatin
2
variant allelic effects
Annotation Category
2
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
1
Adipose SGBS cell line (adipocyte)
1
Preadipose SGBS cell line (adipocyte)
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
Date released
2
May, 2020
Software used
2
deltasvm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
candidate regulatory elements
month_released!
August, 2022
Showing 2 of 2 results
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FileSet
DSR181VXG
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic progenitor ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR835LQY
released
Annotation file set
: Genetic variants with deltaSVM predictions in beta cell iPS-derived pancreatic progenitor ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP